Publications

Article

• Hugo Y.K. Lam , Philip M. Kim, Janine Mok, Raffi Tonikian, Sachdev S. Sidhu, Benjamin E. Turk, Michael Snyder and Mark B. Gerstein. MOTIPS: Automated Motif Analysis for Predicting Targets of Modular Protein Domains. BMC Bioinformatics. 2010 May 11;11:243.

  

• Janine Mok, Philip M. Kim, Hugo Y.K. Lam et al. Deciphering protein kinase specificity through large-scale analysis of yeast phosphorylation site motifs. Science Signaling. 2010 Feb 16;3(109):ra12.
  • Download the average PWMs for each of the 61 kinases assayed
  • Download the MOTIPS output for each of the 61 kinases assayed

  

Conference

• Hugo Y.K. Lam*, Philip M. Kim*, Raffi Tonikian, Janine Mok, Ben Turk, Gary Bader, Charlie Boone, Michael Snyde and Mark Gerstein. A Motif Analysis Pipeline for Predicting Domain Binding Targets [Abstract]. In proceedings of the FEBS Workshop on The Biology of Modular Protein Domain. Seefeld, Austria (2007).