Functional studies with 1KG individuals |
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RNA-seq |
Citation |
PMID |
#ind |
fastq |
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gEUVADIS |
Lappalainen, T.
et al., Nature,
2013 |
24037378 |
461 |
ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEUV/ |
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ENCODE |
ENCODE Project
Consortium, Nature, 2012 |
22955616 |
3 |
https://www.encodeproject.org/ |
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Lalonde
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Lalonde et
al., Genome Res (2011) |
21173033 |
2 |
ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR074/;ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR085 |
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Montgomery
et al |
Montgomery et
al., Nature (2010) |
20220756 |
60 |
http://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-197 |
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Pickrell
et al |
Pickrell et al.,
Nature (2010) |
20220758 |
69 |
http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-19480/?query=GSE19480 |
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Kilpinen
et al |
Kilpinen et
al., Science (2013) |
24136355 |
14 |
http://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-1883/?query=kilpinen |
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Kasowski
et al |
Kasowski et
al., Science (2013) |
24136358 |
14 |
http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE50893 |
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ChIP-seq |
Citation |
PMID |
#ind |
#TFs |
#histoneMarks |
fastq |
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ENCODE |
ENCODE Project
Consortium, Nature, 2012 |
22955616 |
33 |
59 |
0 |
https://www.encodeproject.org/ |
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McVicker
et al |
McVicker et
al., Science (2013) |
24136359 |
10 |
1 |
4 |
http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-47991/ |
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Kilpinen
et al |
Kilpinen et
al., Science (2013) |
24136355 |
14 |
4 |
5 |
http://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-1884/?query=kilpinen |
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Kasowski
et al |
Kasowski et
al., Science (2013) |
24136358 |
15 |
2 |
5 |
http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE50893 |
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MORE Functional
studies with 1KG individuals |
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RNA-seq |
Citation |
PMID |
#ind |
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Toung et
al |
Toung et al., Genome Res (2011) |
21536721 |
20 |
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Wang et
al |
Wang et al., Cell Rep (2014) |
24561252 |
2 |
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Li et
al. |
Li et al., Science (2011) |
21596952 |
27 |
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ChIP-seq |
Citation |
PMID |
#ind |
#TFs |
#histoneMarks |
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Ding et
al |
Ding et a., PLoS Genetics (2014) |
25411781 |
51 |
1 |
0 |
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