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######## CITATION ######################
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Chen J, Rozowsky J, Galeev TR, Harmanci A, Kitchen R, Bedford J, Abyzov A, Kong Y, Regan L, Gerstein M. A uniform survey of allele-specific binding and expression over 1000-Genomes-Project individuals (2016) Nat Commun.


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######## WEBSITE #######################
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For more detailed documentation of the resources here, please visit the following website:
http://alleledb.gersteinlab.org/docs/


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######## PERSONAL GENOMES ##############
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We provide 382 personal diploid genomes (autosomal FASTA files) and chain files (for mapping to the human reference genome, hg19, and back to the parental genomes). Each folder contains:
1) phased diploid genomes, based on the SNVs and indels from Phase 1 1000 Genomes Project (1000GP)
2) 'paternal' (P) and 'maternal' (M) origin are phased according to P|M for each variant in 1000GP VCF of individual.
3) unphased genotypes are randomly phased
4) genomes are built using the vcf2diploid tool v0.2.6 (http://alleleseq.gersteinlab.org/tools.html)



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######## AS SNVs #######################
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These are results from the AlleleDB paper: ASB and ASE SNVs identified by our pipeline.





For comments and questions, please email jieming dot chen at yale dot edu

Copyright 2016. GersteinLab@Yale